PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_31416-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 332aa    MW: 36048 Da    PI: 7.1492
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_31416-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10163221563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      kr++r   NR +A rs +RK +++ eLe+kv++L++e ++L  +l  l+   + l++e+
  TRIUR3_31416-P1 163 KRAKRILANRQSAARSKERKIKYTGELERKVQTLQTEATTLSAQLTLLQRDTSGLTTEN 221
                      9**********************************************999888888776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-15159223IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.841161224IPR004827Basic-leucine zipper domain
PfamPF001703.1E-9163221IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.1E-11163217No hitNo description
SuperFamilySSF579591.05E-10163214No hitNo description
CDDcd147033.25E-24164213No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MDPRFQLPTP VPSPGGTGVR GHHRRAHSET FLRFPDIDLF LDPDGDFSFS DLDFPSLSDD  60
SPAVSDPTPP PPPPMAASSS QTPAPRPPGG THNRSLSLDA AFFEGLALQG GGGGGGGGHK  120
RSGSMDGVNS PFEGESALSG GLDYAKKAMP AERIAELALL DPKRAKRILA NRQSAARSKE  180
RKIKYTGELE RKVQTLQTEA TTLSAQLTLL QRDTSGLTTE NRELKLRLQS MEEQAKLRDA  240
LNDALREEVQ RLKIAAGQAP NMNGSQFNGG FQQIPSYFSQ QHQRQQQQQQ QQQMAYIGGH  300
QAQRHHPNHH QSPSNGGQSL SGLSLDDSMD FI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3726160.0AK372616.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3007C09.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578876.11e-175PREDICTED: transcription factor VIP1-like
SwissprotQ9MA758e-74VIP1_ARATH; Transcription factor VIP1
TrEMBLM7ZXD00.0M7ZXD0_TRIUA; Transcription factor VIP1
STRINGBRADI4G41890.11e-175(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.18e-50VIRE2-interacting protein 1